diff --git a/CHANGELOG.md b/CHANGELOG.md
index ce3a8442..4e98c671 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -34,6 +34,7 @@
 - Dev: Words from `TextElement`s are now combined where possible. (#5847)
 - Dev: Fixed assertion failure when closing the edit-hotkey dialog. (#5869)
 - Dev: Updated `qtkeychain` to 0.15.0. (#5871)
+- Dev: Fixed duplicate CMake configure in clean builds. (#5940)
 
 ## 2.5.2
 
diff --git a/cmake/resources/generate_resources.cmake b/cmake/resources/generate_resources.cmake
index df227a7d..75de92e6 100644
--- a/cmake/resources/generate_resources.cmake
+++ b/cmake/resources/generate_resources.cmake
@@ -21,12 +21,22 @@ list(FILTER RES_IMAGE_FILES EXCLUDE REGEX ${RES_IMAGE_EXCLUDE_FILTER})
 ###############################
 # Generate resources_autogenerated.qrc
 ###############################
+set(WINDOWS_ARGUMENTS "@Invalid()") # empty QVariant() in QSettings
+if (CHATTERINO_USE_GDI_FONTENGINE AND Qt${MAJOR_QT_VERSION}_VERSION VERSION_GREATER_EQUAL "6.8.0")
+    message(STATUS "Using legacy GDI fontengine")
+    set(WINDOWS_ARGUMENTS "fontengine=gdi")
+endif ()
+
+configure_file("${CMAKE_CURRENT_LIST_DIR}/qt.conf.in" "${CMAKE_BINARY_DIR}/autogen/qt.conf")
+set(RES_QT_CONF_PATH "${CMAKE_BINARY_DIR}/autogen/qt.conf")
+
 message(STATUS "Generating resources_autogenerated.qrc")
 foreach (_file ${RES_ALL_FILES})
-    list(APPEND RES_RESOURCES_CONTENT "    <file>${_file}</file>")
+    list(APPEND RES_RESOURCES_CONTENT "    <file alias=\"${_file}\">${RES_DIR}/${_file}</file>")
 endforeach ()
 list(JOIN RES_RESOURCES_CONTENT "\n" RES_RESOURCES_CONTENT)
-configure_file(${CMAKE_CURRENT_LIST_DIR}/resources_autogenerated.qrc.in ${RES_DIR}/resources_autogenerated.qrc @ONLY)
+configure_file("${CMAKE_CURRENT_LIST_DIR}/resources_autogenerated.qrc.in" "${CMAKE_BINARY_DIR}/autogen/resources_autogenerated.qrc" @ONLY)
+list(APPEND RES_AUTOGEN_FILES "${CMAKE_BINARY_DIR}/autogen/resources_autogenerated.qrc")
 
 ###############################
 # Generate ResourcesAutogen.cpp
@@ -88,17 +98,7 @@ if (WIN32)
     list(APPEND RES_AUTOGEN_FILES "${CMAKE_BINARY_DIR}/autogen/windows.rc")
 endif ()
 
-set(WINDOWS_ARGUMENTS "@Invalid()") # empty QVariant() in QSettings
-if (CHATTERINO_USE_GDI_FONTENGINE AND Qt${MAJOR_QT_VERSION}_VERSION VERSION_GREATER_EQUAL "6.8.0")
-    message(STATUS "Using legacy GDI fontengine")
-    set(WINDOWS_ARGUMENTS "fontengine=gdi")
-endif ()
-
-configure_file("${CMAKE_CURRENT_LIST_DIR}/qt.conf.in" "${CMAKE_SOURCE_DIR}/resources/qt.conf")
-list(APPEND RES_AUTOGEN_FILES "${CMAKE_SOURCE_DIR}/resources/qt.conf")
-
 list(APPEND RES_AUTOGEN_FILES
-        "${CMAKE_SOURCE_DIR}/resources/resources_autogenerated.qrc"
         "${CMAKE_BINARY_DIR}/autogen/ResourcesAutogen.cpp"
         "${CMAKE_BINARY_DIR}/autogen/ResourcesAutogen.hpp"
         )
diff --git a/cmake/resources/resources_autogenerated.qrc.in b/cmake/resources/resources_autogenerated.qrc.in
index 9e28de4a..ec65d90e 100644
--- a/cmake/resources/resources_autogenerated.qrc.in
+++ b/cmake/resources/resources_autogenerated.qrc.in
@@ -7,6 +7,6 @@
 @RES_RESOURCES_CONTENT@
   </qresource>
   <qresource prefix="/qt/etc">
-    <file>qt.conf</file>
+    <file alias="qt.conf">@RES_QT_CONF_PATH@</file>
   </qresource>
-</RCC>
\ No newline at end of file
+</RCC>
diff --git a/lib/twitch-eventsub-ws/CMakeLists.txt b/lib/twitch-eventsub-ws/CMakeLists.txt
index 53f36565..535eb7ba 100644
--- a/lib/twitch-eventsub-ws/CMakeLists.txt
+++ b/lib/twitch-eventsub-ws/CMakeLists.txt
@@ -1,7 +1,6 @@
 cmake_minimum_required(VERSION 3.15)
 cmake_policy(SET CMP0087 NEW) # evaluates generator expressions in `install(CODE/SCRIPT)`
 cmake_policy(SET CMP0091 NEW) # select MSVC runtime library through `CMAKE_MSVC_RUNTIME_LIBRARY`
-include(FeatureSummary)
 
 list(APPEND CMAKE_MODULE_PATH
     "${CMAKE_SOURCE_DIR}/cmake"
@@ -33,5 +32,3 @@ set(CMAKE_CXX_STANDARD_REQUIRED ON)
 include(cmake/GenerateJson.cmake)
 
 add_subdirectory(src)
-
-feature_summary(WHAT ALL)